Investigations
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Neuronal loss in acute or chronic brain disease could be treated by neuronal replacement strategies, such as transplantation of young neurons, if they integrate properly into the existing networks. Here we explore the cell-based and molecular mechanisms causing hyperinnervation and overshoot loss of input connectivity as well as the newly discovered hurdle in output connectivity, the lack of myelination. Candidate as well as unbiased approaches are pursued to identify the critical checkpoints and ...
Submitter: Camilla Giudici
Studies: Astrocyte heterogeneity reveals region-specific astrogenesis in the whit..., Brain injury environment critically influences the connectivity of trans..., Direct neuronal reprogramming of NDUFS4 patient cells identifies the unf..., Direct neuronal reprogramming of mouse astrocytes is associated with mul..., Heterogeneity of neurons reprogrammed from spinal cord astrocytes by the..., Injury-specific factors in the cerebrospinal fluid regulate astrocyte pl..., Single Cell Deletion of the Transcription Factors Trps1 and Sox9 in Astr...
Assays: Expression profiling, Expression profiling by array, Expression profiling: Bulk RNA-seq (human), Expression profiling: Bulk RNA-seq (mouse), Expression profiling: Single-cell multiome (scRNA-seq + scATAC-seq), Bul..., Expression profiling: Spatial Transcriptomics (mouse), Expression profiling: Spatial Transcriptomics (mouse), Expression profiling: scRNA-seq (human) (Day 20), Expression profiling: scRNA-seq (human) (Day 5), Expression profiling: scRNA-seq (mouse), Expression profiling: scRNA-seq (mouse), Expression profiling: scRNA-seq (mouse), Shotgun proteomics (human), Shotgun proteomics (mouse), scRNA-seq and scATAC-seq
Circuit remodelling following brain trauma represents compensatory changes that may restore lost function. We investigate network remodelling in the visual system of zebrafish as it allows an unbiased systems-based approach to identify the changes and checkpoints that enable compensatory circuit repair. After ablating specific retinal photoreceptors, we will probe changes in network activity and structural remodelling in central visual circuits, as well as investigate the contribution of glial ...
In multiple sclerosis, an “energy crisis”, which entails axonal ATP depletion, contributes to neuronal dysfunction and ensuing neurodegeneration. We have identified dysregulation of the TCA cycle and specifically depletion of its pacemaker enzyme, IDH3, as a critical checkpoint of neuronal energy homeostasis. Targeting IDH3, however, leads only to partial reversal of axonal ATP deficits, pointing to further neuroenergetic checkpoints. We now plan to identify these checkpoints and study their ...
Submitter: Camilla Giudici
Studies: A genome-wide in vivo CRISPR screen identifies essential regulators of T..., Phagocyte-mediated synapse removal in cortical neuroinflammation is prom..., Targeting the TCA cycle can ameliorate widespread axonal energy deficien..., Twin study identifies early immunological and metabolic dysregulation of...
Assays: Expression profiling: Bulk RNA-seq (mouse), Expression profiling: Bulk RNA-seq (rat), Expression profiling: scRNA-seq (human), Expression profiling: scRNA-seq (human), Genome wide (GW) and validation CRISPR screens (rat), Shotgun proteomics (mouse)
In demyelinating CNS diseases, remyelination is mostly driven by newly differentiating oligodendrocytes (OLs) but often remains insufficient. Our recent work shows that surviving OLs can contribute to myelin repair both in animal models of multiple sclerosis and in patients, although this contribution is often inefficient. We believe that surviving OLs can be recruited to the remyelination process if we target the molecular checkpoints determining their repair capacity in the inflamed CNS. ...
Submitter: Camilla Giudici
Studies: Constitutive neuronal expression and disease-associated upregulation of ...
Assays: No Assays
Despite the critical role of microglia in human brain pathologies, the molecular mechanisms that govern the diverse and context-dependent set of phenotypes are poorly understood. This project will introduce a highly versatile human brain organoid-based in vivo platform for investigating human glial cells that operate within a vascularized human brain-like environment. Using this platform, we aim to dissect the molecular networks that control human microglia cell responses during CNS injury in ...
Submitter: Camilla Giudici
Studies: A scalable human-zebrafish xenotransplantation model reveals gastrosome-...
Assays: Expression profiling (human)
Traumatic brain injuries (TBIs) cause primary tissue damage and activate glial cells to build glial border, thereby delineating the injured brain parenchyma from the healthy surrounding tissue. However, this necessary primary reaction of glial cells often persists. This long-lasting glial activation results in prolonged and exacerbated neuroinflammation that prevents tissue restoration. We propose that a cross-regulatory network between innate immunity pathways and EV cargo defines an important ...
Submitter: Camilla Giudici
Studies: Innate Immune Pathways Promote Oligodendrocyte Progenitor Cell Recruitme..., Shared inflammatory glial cell signature after stab wound injury, reveal...
Assays: Expression profiling: Microarray (zebrafish), Expression profiling: Spatial Transcriptomics (mouse), Expression profiling: scRNA-seq (mouse)
Childhood-onset white matter diseases including multiple sclerosis and monogenetic leukoencephalopathies, are characterized by neuroinflammatory tissue damage. Here, we propose that CD8+ T cell phenotypes within lesions serve as critical immune checkpoints for tissue damage and regeneration. Our objective is to define CD8+ T cell-driven disease and regenerative pathways by utilizing a combination of multifluorescent immunohistochemistry, spatial transcriptomics and multimodal MR imaging in patients ...